Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFLKDKCEVIYLKRTEGISTTKIKQELYGKDAK
1COZ Chain:B ((1-126))
MKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQKKQDIIDHNIDVFVMGDDWEGKFDFLKDQCEVVYLPRTEGISTTKIKEEI------
General information:
TITO was launched using:
RESULT:
Template:
1COZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62893 for 936 contacts (-67.2/contact) +
2D Compatibility (PS) -14078 + (NN) -6562 + (LL) 116
1D Compatibility (HY) -17200 + (ID) 4400
Total energy: -105017.0 ( -112.20 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_1COZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1COZ-query.scw
PDB file :
Tito_Scwrl_1COZ.pdb
: