Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKNLFLGFVAVILTVCLIGLLILATNEDALAKVHKTINTLNAINVSTEDTYKKKMDILNIHTAKASEVNENVEKQNHFKHRVNANKSNSFNEQECQVIADRYADKHINDNYGLERISKTNHGYNYVYSNDNSTSKQHVSISNQGIITK
4RUI Chain:B ((271-327))
MTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKM---------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4RUI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12205 for 250 contacts (-48.8/contact) +
2D Compatibility (PS) -5811 + (NN) -3290 + (LL) 4796
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -19010.0 ( -76.04 by residue)
QMean score : 0.680
(partial model without unconserved sides chains):
PDB file :
Tito_4RUI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RUI-query.scw
PDB file :
Tito_Scwrl_4RUI.pdb
: