Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNEIQILNNGYPMPSVGLGVYKISDEDMTKVVNAAIDAGYRAFDTAYFYDNEASLGRALKDNGVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTDYLDLFLIHWPCEADGLFLETYKAMEELYEQGKVKAIGVCNFNVHHLEKLMAQSSIKPMVNQIEVHPYFNQQELQEFCDRHDIKVTAWMPLMRNRGLLDNPVIVKIAEKYHKTPAQVVLRWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALDRNARQGKNPDDVKIGDLK
3O0K Chain:D ((31-283))
-------LNDGNHIPQLGYGVWQISNDEAVSAVSEALKAGYRHIDTATIYGNEEGVGKAINGSGIARADIFLTTKLWNSDQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQDELRLFHGKHDIATEAWSPLG--K-LLEDPTLKSIAEKHAKSVAQIILRWHIETGNIVIPKSITPARIKENFDIFDFTLNGTDHDAITKLD------------------
General information:
TITO was launched using:
RESULT:
Template:
3O0K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154345 for 2176 contacts (-70.9/contact) +
2D Compatibility (PS) -27227 + (NN) -13050 + (LL) 1140
1D Compatibility (HY) -23600 + (ID) 6150
Total energy: -223232.0 ( -102.59 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_3O0K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O0K-query.scw
PDB file :
Tito_Scwrl_3O0K.pdb
: