Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK
3QWD Chain:C ((3-195))--LIPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLG---GQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK


General information:
TITO was launched using:
RESULT:

Template: 3QWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126622 for 1440 contacts (-87.9/contact) +
2D Compatibility (PS) -20095 + (NN) -8466 + (LL) 276
1D Compatibility (HY) -25600 + (ID) 9200
Total energy: -189707.0 ( -131.74 by residue)
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_3QWD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QWD-query.scw
PDB file : Tito_Scwrl_3QWD.pdb: