Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
1WJK Chain:A ((21-94))
--LFTK-APCPLCDEA------KEVLQPYKDR------FILQEVDITLPE------NSTWYERY--K-FDIPVFHLNGQFLMMHRVNTSKLEKQLRKL----
General information:
TITO was launched using:
RESULT:
Template:
1WJK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69611 for 484 contacts (-143.8/contact) +
2D Compatibility (PS) -7521 + (NN) 1188 + (LL) 1272
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -81072.0 ( -167.50 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_1WJK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WJK-query.scw
PDB file :
Tito_Scwrl_1WJK.pdb
: