Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVR |
2RLW Chain:A ((1-34)) | --------------------------------------------------------------------------------VFHAYSARGVRNNYKSAVGPADWVISAVRGFIHG--------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2RLW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 6809 for 134 contacts (50.8/contact) +
2D Compatibility (PS) -3603 + (NN) 668 + (LL) 9616
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 12040.0 ( 89.85 by residue)
QMean score : 0.466
|
|
|