Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
2O8X Chain:A ((6-61))
-----------LVEVTTMIAD-LTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLA------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2O8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19443 for 370 contacts (-52.5/contact) +
2D Compatibility (PS) -5802 + (NN) 1192 + (LL) 5008
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -22395.0 ( -60.53 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_2O8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O8X-query.scw
PDB file :
Tito_Scwrl_2O8X.pdb
: