Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILVRDKSKK--------RPLN--IS-QYHLTEDVNEILN----DDSLDIIVEVMGGIEPTVDWLRTALKNKKHVITANKDLLAVHLKLLEDLA--EENGVALKFEASVAGGIPIVNAINNGLN-ANNISKFMGILNGTSNFILSKMTKE---QTTFEEALDEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVIK-LNDVKRRGISGVTLT---------------------DINVADQLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEYNAIYVIGDA-VGDTMFYGKGAGSLATGSAVVSDLLNVALFFESDLHTLPPHFELKTDKTREMMDSDAEINIKEKSNFFVVVNHVKGSIENFENELKAILPFHRSLRVANYDNQSYAAVIVGLESSPEELITKHGYEVDKVYPVEGV |
| 1EBF Chain:A ((2-357)) | TKVVNVAVIGAGVVGSAFLDQLLAMKSTI----TYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPKPVILVDNTSSA-YIAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVYHEATVGAGLPIISFLREIIQTGDEVEKIEGIFSGTLSYIFNEFSTSQANDVKFSDVVKVAKKLGYTEPDPRDDLNGLDVARKVTIVGRIS-GVEVESPTSFPVQSLIPKPLESVKSADEFLEKLSDYDKDLTQLKKEAATENKVLRFIGKVDVAT--KSVSVGIEKYDYSHPFASLKGSDNVISIKTKRYTNPVVIQGAGAGAAVTAAGVLGDVIKIAQR---------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162009 for 2585 contacts (-62.7/contact) +
2D Compatibility (PS) -32270 + (NN) 1412 + (LL) 7524
1D Compatibility (HY) -13200 + (ID) 3550
Total energy: -202093.0 ( -78.18 by residue)
QMean score : 0.439
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