Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNYHLLEDRDVLCIDQKSFFASVSCIEKG------LDPLETKLAVVADTKRQGSVILAATPKLKELGIKTGSRLFEIPH-RND---IYIINPSMRKYLNVSVAISKIALRY--IPPEDLHQYSIDEFFMDV--TDSYHRFSSTVHAFCERLKREIYEET-GIYCTVGIGSNMLLSKIAMDVEAKHSQNGIAEWRYQD-VPTKLWPIQPLRDFWGINRRTEAKLNKR--GIFTIGDLAK-YPYKFLKKEFGI-LGVDMHLHANGIDQSKVREK-----HKISNPSICKSQILMRDY-HFDEAKVVMQELIEDVASRVRARKKVARTIHFAFGYS--D-------------EGGVHKQYTLKDPTNLEKDIYKVVMHFADKLCNKQALYRTLSISLSQFINEDERQLSLFEDEYQRKRDECLAKTIDQLHLKYGKGIVSKAVSFTEAGTKHGRLGLMAGHKM |
| 2AQ4 Chain:A ((47-433)) | ----TDKDTYIIFHIDFDCFFATVAYLCRSSSFSACDF-KRDPIVVCHGT--KNSDIASCNYVARSYGIKNGMWVSQAEKMLPNGIKLISLPYTFEQFQLKSEAFYSTLKRLNIFNL--ILPISIDEAVCVRIIPD------TLNARLCEEIRQEIFQGTNGCTVSIGCSDSLVLARLALKMAK---PNGYNITFKSNLSEEFWSSF-KLDDLPGVGHSTLSRLESTFDSPHSLNDLRKRYTLDALKASVGSKLGMKIHLALQGQDDEESLKILYDPKEVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLNEINKTTSQITLKLMRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIPTNEFGIIATEMKSLYRTLGCPPMELRGLALQFNKLVD------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184934 for 2530 contacts (-73.1/contact) +
2D Compatibility (PS) -36545 + (NN) -11726 + (LL) 5096
1D Compatibility (HY) -16800 + (ID) 3150
Total energy: -248059.0 ( -98.05 by residue)
QMean score : 0.425
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