Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQGTVKWFNAEKGFGFIEVEGENDVFVHFSAINQDGYKSLEEGQAVEFEVVEGDRGPQAANVVKL
1C9O Chain:B ((1-66))
MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVVKL
General information:
TITO was launched using:
RESULT:
Template:
1C9O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32291 for 454 contacts (-71.1/contact) +
2D Compatibility (PS) -6822 + (NN) 822 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 2400
Total energy: -49491.0 ( -109.01 by residue)
QMean score : 0.780
(partial model without unconserved sides chains):
PDB file :
Tito_1C9O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C9O-query.scw
PDB file :
Tito_Scwrl_1C9O.pdb
: