Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNYSFYQFV-MTVRGRHDDKGRLAEEIFDDLAFPKHDDDFNILSDYIETHGDFTLPM-SVFDDLYEEYTEWLKF--
2O6K Chain:A ((4-75))
---YSFYQFVMTV-RGRHDDKGRLAEEIFDDLAFPKHDDDFNILSDYIETHGDFT-LPMSVFDDLYEEYTEWLKFLE
General information:
TITO was launched using:
RESULT:
Template:
2O6K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12827 for 427 contacts (30.0/contact) +
2D Compatibility (PS) -7033 + (NN) -756 + (LL) 560
1D Compatibility (HY) 2400 + (ID) 650
Total energy: 7348.0 ( 17.21 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_2O6K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O6K-query.scw
PDB file :
Tito_Scwrl_2O6K.pdb
: