Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYIAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF |
| 3EFS Chain:A ((11-161)) | ------------------------------------------------------------------------------------------VDSTQERLKEWNVSYGTA--LVADRQTKGRGRLGRKWLSQEG-GLYFSFLLNPK-EFENLLQLPLVLGLSVSEALEEITEIPFSLKWPNDVYFQEKKVSGVLRELSKDK-----LIVGIGINVNQR--EIPEEIKDRATTLYEITGKDWDRKEVLLKVLKRI----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72376 for 1148 contacts (-63.0/contact) +
2D Compatibility (PS) -16267 + (NN) -7002 + (LL) 12208
1D Compatibility (HY) -16000 + (ID) 2750
Total energy: -102187.0 ( -89.01 by residue)
QMean score : 0.429
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