Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIH--ETGKFLFPGSGHYTERGEDIGYGHTVNVP----LEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDI--HYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ |
| 2VQO Chain:B ((158-338)) | ---------------------------------------------------------------------------------------------------------------------------------------HHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNF-FPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFG---YLTKQLM-GLAGGRIVLALEGGYDLTAIC----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112429 for 1359 contacts (-82.7/contact) +
2D Compatibility (PS) -18639 + (NN) -10470 + (LL) 14788
1D Compatibility (HY) -13200 + (ID) 3100
Total energy: -143050.0 ( -105.26 by residue)
QMean score : 0.393
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