Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQDNSTKYLLYIQ-----TATSNHLETNCVFLHCDYILKVPINKLVSYYAKLHLSSQSVLIETAKNILNINKLVPIYIN-------PKTILFPLKHKR--APIQIYINAHYI----VGMTAIENSTLIHFQEGIQLEVDEPFSLVSKKCHESLALKHFIENTISN------------------ |
1JK8 Chain:A ((1-181)) | VADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSV--TEGVSETSFLSKSDHSFFKISYLTFLPSDDEIYDCKVEHWGLDEPLLKHWEPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31812 for 884 contacts (-36.0/contact) +
2D Compatibility (PS) -14650 + (NN) 8423 + (LL) 176
1D Compatibility (HY) 1200 + (ID) 1150
Total energy: -37813.0 ( -42.77 by residue)
QMean score : 0.101
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