Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDSNQGLQANPQYTIHYLSQEITRLTQENAMLKAYIQEQNEKSKSAEEE
1E9K Chain:A ((1-38))
VPEVD-----NPHCPNPWLNEDLVKSLRENLL-------QHEKSKTARKS
General information:
TITO was launched using:
RESULT:
Template:
1E9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13319 for 173 contacts (77.0/contact) +
2D Compatibility (PS) -3757 + (NN) -936 + (LL) 1292
1D Compatibility (HY) -1600 + (ID) 550
Total energy: 7768.0 ( 44.90 by residue)
QMean score : 0.188
(partial model without unconserved sides chains):
PDB file :
Tito_1E9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E9K-query.scw
PDB file :
Tito_Scwrl_1E9K.pdb
: