Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNQSYLNVYFICGTSDVPSHRTIHEVLEAALKAGITLFQFREKGESALKGNDKLVLAKELQHLCHQYDVPFIVNDDVSLAKEINADGIHVGQDDAKVKEIAQYFTDKIIGLSISDLDEYAKSDLTHVDYIGVGPIYPTPSKHDAHIPVGPEMIATFKEMNPQLPIVAIGGINTNNVAPIVEAGANGISVISAISKSENIEKTVNRFKDFFNN
1G4S Chain:B ((14-217))
---KELLSVYFIMGSNNTKADPVT--VVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAIGDMILGVAAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFRE----
General information:
TITO was launched using:
RESULT:
Template:
1G4S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155891 for 1738 contacts (-89.7/contact) +
2D Compatibility (PS) -23079 + (NN) -19795 + (LL) 512
1D Compatibility (HY) -14000 + (ID) 4350
Total energy: -216603.0 ( -124.63 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_1G4S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G4S-query.scw
PDB file :
Tito_Scwrl_1G4S.pdb
: