Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWLLEIVISNEHYETFKEYQDNEQLLDIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECHIYTLRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE
1G39 Chain:A ((1-28))
---------------------------------------------------------------------------------------------------MVSKLSQLQTELLAALLESGLSKEALIQ-------------------
General information:
TITO was launched using:
RESULT:
Template:
1G39.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5759 for 113 contacts (-51.0/contact) +
2D Compatibility (PS) -3186 + (NN) -1600 + (LL) 9464
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -4731.0 ( -41.87 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_1G39.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G39-query.scw
PDB file :
Tito_Scwrl_1G39.pdb
: