Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVHVFDHPLIQHKLSYIRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGAKNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDKAYITPGLGDAGDRLFGTK
1O5O Chain:B ((13-221))
MKNLVVVDHPLIKHKLTIMRDKNTGPKEFRELLREITLLLAYEATRHLKCEEVEVETPITKTIGYRINDKDIVVVPILRAGLVMADGILELLPNASVGHIGIYRDPETLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLVALIAAPEGVEAVEKKYEDVKIYVAALDERLNDHGYIIPGLGDAGDRLFRTK
General information:
TITO was launched using:
RESULT:
Template:
1O5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178272 for 1695 contacts (-105.2/contact) +
2D Compatibility (PS) -22134 + (NN) -2675 + (LL) 0
1D Compatibility (HY) -26000 + (ID) 6300
Total energy: -235381.0 ( -138.87 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_1O5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O5O-query.scw
PDB file :
Tito_Scwrl_1O5O.pdb
: