Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTN-----VDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPRCRAHHIVAPSDNNKEEL
2UZ3 Chain:B ((32-217))
-------GWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKIDTRSIR-NIQSRTGTSLPSVEVESAPEILNYIMSNSFNDETKVIGIDEVQFFDDRICEVANILAENGFVVIISGLDKNFKGEPFGPIAKLFTYADKITKLTAICNECGAEATHSLRKIDGKHADYNDDIVKIGCQEFYSAVCRHHHKV----------
General information:
TITO was launched using:
RESULT:
Template:
2UZ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76461 for 1421 contacts (-53.8/contact) +
2D Compatibility (PS) -20071 + (NN) -10399 + (LL) 856
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -128275.0 ( -90.27 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_2UZ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UZ3-query.scw
PDB file :
Tito_Scwrl_2UZ3.pdb
: