Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKIENEIVNKTYLAINSLEELRNMIGIKSDYFYKCLYVNDHFYNVIKIPKRKKDEYRELMIPNMALKNIQRWILDNVLYRR----QVHKCATGFVPRKSIVNNAIPHVGQKYILKMDIENFFPSITFKQVRKIF---SEMGYKFE-LATALANL------------CTVNNQLPQGAPTSPYIANIIFYNIDKRIFSY-CQ------KNNLRYTRYADDITISGSNKVSFSKEIIREIVNQYNFRINES-KTIM-F---KPGDRKKVTGIIVNEKISVPKTLIREVRKQIYFVNKFGLEEHLIRNNYSLDYEQQFIMSIYGKISFIKMIDFKKGVSLQKKFNEVLGNIESSNMYRDNIDFDDIELHWIN |
| 3UQS Chain:A ((178-406)) | ----------------------------------------------------KI-KKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGPFIFARHANFRYHMDADYTRWDSTQQRAILKRAGDIMVRLSPEPDLARVVMDDLLAPSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEVTRVDPDIVMQESEFSFYGDDEVVSTNLELD--MVKYTMALRRYGLLPTRADKEEGPLERRQTLQGISFLRRAIVG----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71241 for 1328 contacts (-53.6/contact) +
2D Compatibility (PS) -19923 + (NN) -7458 + (LL) 11552
1D Compatibility (HY) 400 + (ID) 950
Total energy: -87620.0 ( -65.98 by residue)
QMean score : 0.296
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