Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDFNNNTLTIQATRSAKY--KSEQLILDERNFESLMRQFDF-EAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS
3GLA Chain:A ((3-97))
---------------------------------WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKR---------------
General information:
TITO was launched using:
RESULT:
Template:
3GLA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58521 for 601 contacts (-97.4/contact) +
2D Compatibility (PS) -9829 + (NN) 486 + (LL) 1268
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -71896.0 ( -119.63 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_3GLA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GLA-query.scw
PDB file :
Tito_Scwrl_3GLA.pdb
: