Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRCAKKEDLNAILAIYNDAIINTTAVYTYKPQTIDERIAWFETKQRNHEPIF-VFEENGSVLGFATFGSFRPWPAYQYTIEHSIYVDASARGKGIASQLLQRLIVEAKAKGYRTLVAGIDASNEASIKLHQKFNFKHAGTLTNVGYKFDYWLDLAFYELDLKD
2JLM Chain:D ((13-173))
-VECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTL--
General information:
TITO was launched using:
RESULT:
Template:
2JLM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93899 for 1136 contacts (-82.7/contact) +
2D Compatibility (PS) -17662 + (NN) -6867 + (LL) 196
1D Compatibility (HY) -16800 + (ID) 3800
Total energy: -138832.0 ( -122.21 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_2JLM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JLM-query.scw
PDB file :
Tito_Scwrl_2JLM.pdb
: