Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIKGDKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW |
2A7W Chain:A ((4-94)) | --------------------------------------------------------------------------------------------------------DVLKNIADTLEARREAAPQSSYVASLFHKGEDAILKKVAEEAAETLMASKDKDKLHLVREVADLWFHTMVLLTYHGLRPEDVVMELHRREG--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2A7W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -15964 for 521 contacts (-30.6/contact) +
2D Compatibility (PS) -8913 + (NN) 4103 + (LL) 6560
1D Compatibility (HY) -400 + (ID) 800
Total energy: -15414.0 ( -29.59 by residue)
QMean score : 0.314
|
|
|