Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEGQKVTFEITEGQRGDQAVNVQTV
1C9O Chain:B ((1-63))
MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANV---
General information:
TITO was launched using:
RESULT:
Template:
1C9O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27196 for 422 contacts (-64.4/contact) +
2D Compatibility (PS) -6562 + (NN) -843 + (LL) 364
1D Compatibility (HY) -6800 + (ID) 2100
Total energy: -43137.0 ( -102.22 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_1C9O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C9O-query.scw
PDB file :
Tito_Scwrl_1C9O.pdb
: