Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR |
1VZ0 Chain:G ((23-207)) | ----------------------------VVRLPLASIRPNPRQPRKRFAEESLKELADSIREKGLLQPLLVRP-QGDGYELVAGERRYRAALMAGLQEVPAVVKDLTDREALELALVENLQREDLSPVEEARGYQALLEMG-LTQEEVARRVGKARSTVANALRLLQLPPEALEALERGEITAGHARALLMLEPEDRLWGLKEILEKGLSVRQAE---------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -68239 for 1170 contacts (-58.3/contact) +
2D Compatibility (PS) -20541 + (NN) -14784 + (LL) 6084
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -116080.0 ( -99.21 by residue)
QMean score : 0.741
|
|
|