Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRALETIATLREYRKSLKES------VGFVPTMGALHRGHQSLIERSLKENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKACEKLKK-----LGLEILKNLEVDYLECCNHKLEPLKTIEPANTLVLVAARVGKTRLLDNLWV |
| 3INN Chain:D ((21-298)) | --SMQIIHTIEELRQALAPARQQGKKIGFVPTMGYLHKGHLELVRRARVENDVTLVSIFVNPLQFGAN--------DLERDAGLLHDAQVDYLFAPTVSDMYPRPMQTVVDVPP---LGNQIEGE--PGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRIVGVETVREDDGLACSSRNVYLTPEQRRAAIIVPQALDEADRLYRSGMDDPDALEAAIRTFIGRQPLAVPEVIAIRDP-ETLERLPALQGRPILVALFVRVGATRLLDNRVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3INN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132471 for 2008 contacts (-66.0/contact) +
2D Compatibility (PS) -28078 + (NN) -11103 + (LL) 984
1D Compatibility (HY) -23200 + (ID) 5350
Total energy: -199218.0 ( -99.21 by residue)
QMean score : 0.470
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