Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIFVLLMSVILGISLTGCIGYRMDLEHFNTLYYEESPKKAYEYSKQFTKKK-KNALLWDLQNGLSALYARDYKTSLGVLDQAEQRFDKTQSAFTRGAGYVGATMINDNVRAYGGNIYEGVLINYYKAIDYMLLNDSAKARVQFNRANERQRRAKEFYYEEVQKAIKEIDSSKKHNINMERSRAEVSEILNNTYSNLDKYEAYQGLLNPAVSYLSGLFYALNGDKNKGLGYLNEAYGI-SQSPFVAQDLVFFKNPNRSHFTWIIIEDGKEPQKSEFKIDVPIFMIDSVYNVSVALPKLEKGEAFYQNFTLKDGEKVTPFDTLASIDAVVASEFRKQLPYIITRAILSATFKVGMQAVANYYLGFVGGLVTSLYSGVSTFADTRNTSIFAHKIYLMRIKNKAFESYEVRADSIDAFSFSLKPCKRSLESPKIIDARELLSGFVTAPQVFCSNRHNILYVRSFKNGFVLSHLK
3VTX Chain:A ((10-175))--------------------------DIGDKKRTKGDFDGAIRAYKKV-LKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS------------------------------AEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYK---LGLVYDSMG---------EHDKAIEAYEK--------TISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAKYELALVPR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VTX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4651 for 1285 contacts (3.6/contact) +
2D Compatibility (PS) -17522 + (NN) -6303 + (LL) 21356
1D Compatibility (HY) 3200 + (ID) 1000
Total energy: 4382.0 ( 3.41 by residue)
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_3VTX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VTX-query.scw
PDB file : Tito_Scwrl_3VTX.pdb: