Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSVTLACGNGGKETNALIERVFMPYLKEW-IVAFDEDA-PKFEASGEYCVSTDSFVITPLIFNGGDIGKLCVCGSANDVSVQGGEPLYLNMGFILEEGLEIPLLKQILQSIQKELFKANLKLLSLDTKVVPKGSVDKLFINTTCIGKIIK-PGISSRHLQQGQAIILSDTIANHGASLFATRHEIKLKTNLQSDCQLLYPLLKPLFLSDLKIDALRDATRGGLASVLNEWANSSRVKIVIEEEKIPLKEETKGICEILGLEPYALANEGVFVLALNQKDAPKALEILKSNEKAKNACVIGGVFENPYPSVVLKNAWGFERILEMPEGELLPRIC
3VTI Chain:C ((2-305))----------------ALIEEVFADAFDNEYIRAMEDAALLF----GNITLTTDSFTVKPLFFPGGDIGKLAVCGTVNDASMRGAKPLFLTAAFIIEEGFPVEDLKKIVKSMAEAAKEAGVKIVAGDTKVVEKGSVDRIFINTSGIGVLYEGANVSIKNAKPGDIVLISGTIGDHGMAVMSAREELQFDTPIFSDVAPLNGLIEKLMTLGEAIKVLRDPTRGGVAEVLYEISKMSGVGIKIYEEKLPVKESVKSACEFMGIDFLHLANEGKVVVVVERDYAEKALEIMKSHEYGKDAEIIGEVN-DSKL-VTINTIYGTSRIVDRP---------


General information:
TITO was launched using:
RESULT:

Template: 3VTI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -190336 for 2626 contacts (-72.5/contact) +
2D Compatibility (PS) -31693 + (NN) -6500 + (LL) 1304
1D Compatibility (HY) -25200 + (ID) 6350
Total energy: -258775.0 ( -98.54 by residue)
QMean score : 0.415

(partial model without unconserved sides chains):
PDB file : Tito_3VTI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VTI-query.scw
PDB file : Tito_Scwrl_3VTI.pdb: