Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIERLVGNLRDLNPLDFNVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPHSEPNFKVSLASDFKVVVK
3NXZ Chain:D ((2-150))
-IIERLVGNLRDLNPLDFSVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSM--------------------
General information:
TITO was launched using:
RESULT:
Template:
3NXZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58498 for 1048 contacts (-55.8/contact) +
2D Compatibility (PS) -15550 + (NN) -2641 + (LL) 1380
1D Compatibility (HY) -21600 + (ID) 7400
Total energy: -104309.0 ( -99.53 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_3NXZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NXZ-query.scw
PDB file :
Tito_Scwrl_3NXZ.pdb
: