Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAIKILLIMTLSLNAISVNRALFDLKDSQLKGELTPKIVDFGGYKSNTTEWGATALNYINAANGDAKKFSALVEKMRFNSGILGNFRAHAHLRQALKLQKNLKYCLKIIARDSFYSYRTGIYIPLGISLKDQKTAQKMLADLSVVGAYLKKQQENEKAQSPYYRSNNYYNSYYSPYYGMYGMYGMGMYGMYGMGMYDFYDFYDGMYGFYPNMFFMMQVQDYLMLENYMYALDQEEILDHDASINQLDTPTDDDRDDKDDKSSQPANLMSFYRDPKFSKDIQTNRLNSALVNLDNSHMLKDNSLFHTKAMPTKSVDAITSQAKELNHLVGQIKEMKQDGASPNKIDSVVNKAMEVRDKLDNNLNQLDNDLKDQKGLSSEQQAQVDKALDSVQQLSHSSDVVGNYLDGSLKIDGDDRDDLNDAINNPMQQPAQQTPINNMDNTHANDSKDQGGNALINPNNATNDDHNDDHMDTNTTDTSNANDTPTDDKDASGNNTGDMNNTDTGNTDTGNTDTGNTDDMSNMNNGNDDTGNTNDDMGNSNDMGDDMNNANDMNDDMGNSNDDMGDMGDMNDDMGGDMGDMGDMGGDMGN |
| 1SFC Chain:B ((9-80)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10433 for 285 contacts (36.6/contact) +
2D Compatibility (PS) -7595 + (NN) -1265 + (LL) 17172
1D Compatibility (HY) -2400 + (ID) 250
Total energy: 16095.0 ( 56.47 by residue)
QMean score : 0.563
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