Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSTRIGSKIVMMVCAVVIVISAVMGVIISYKVESVLQSQATELLQKKAQLVSFKIQGIMKRIFMGANTLERFLSDENGAINDTLKRRMLSEFLLANPHVLLVSAI-YTNNNERMITAMNMDSKIAYPNTALNENMTNQIHSLKSITRSDPYYKEVNGDKIYGMDITLPLMGK-NQNVIGALNFFLNIDAFYTDVV---GKKKSNTFLMGKDGRILINPNREIQDKILSAINPDKRVAKAVEYYNQNEAGTLSYHSLSGNTETFLAIQPFDFFEEKGNNGNHWRWAIGKYVNKSLVFKEATNTKFIIITTLILGVLVLAFLVFIIISNLITKRISRVNNTLNDFFNLLNNPKNNHAISLTPPSAYDEIGQMQASINENILKTQESIQADNKAIQNSIEVTNYVENGDFTQEIACVPKNKDLQALRNTINSIIQYFRNQIGADIESLNNALEHYKNLDFTHHIQNPKANMEKALNTLGQEISSMLKASLGFANALNHESKDLKTCVDNLTKTAHKQERSLKNTTQSLEEITNIITMIDSKSQEMISQGEDIKSVVDMIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSIADNAESIKMQNKGVENIHNSINALQQDVQDNLTIANHSLQVSTKIDGISQDILEDVSKKKF |
| 3C8C Chain:A ((7-237)) | -----------------------------------------SDSVDEIVDGVSKTTAEVINGRKSIAQYATSLIENNP---EPDNVRTIISQPLIKN-TF-LLVGFGLEKDGSNINNDPSWNP--GPTWDPRVRPWYKDAKNAGKLVITAPYADSASG--EILVSVATPVKDSATGQFLGSIFYDVSLAELAELVNEVKLFDAGYVFIVSEDGTTIAHPKKEFNGKPMSEF-----LGE--SKI---NVDTHQVI--INGKPYAVSFSDVE----------GEDWYVGVVIDEEIAYAALDELRRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -109261 for 1782 contacts (-61.3/contact) +
2D Compatibility (PS) -24142 + (NN) -8965 + (LL) 32892
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -118276.0 ( -66.37 by residue)
QMean score : 0.316
|
|
|