Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKEQEAQEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLNQEQK
4CIM Chain:P ((1-21))
-----------------------------------------AADPLGQALRAIGDEFETRFR
General information:
TITO was launched using:
RESULT:
Template:
4CIM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3474 for 79 contacts (44.0/contact) +
2D Compatibility (PS) -2307 + (NN) -1516 + (LL) 5292
1D Compatibility (HY) -1600 + (ID) 100
Total energy: 3243.0 ( 41.05 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_4CIM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CIM-query.scw
PDB file :
Tito_Scwrl_4CIM.pdb
: