Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL
4BMZ Chain:B ((22-251))
VQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVAIQLVQHDVDLSAFDHPLGFIPESAIFIETSESLNALAKEVANEQHIVLKEGVIASGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISNNADEEANMSFDAFLEKSAQTSAKFLKSMVDEL
General information:
TITO was launched using:
RESULT:
Template:
4BMZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169093 for 2068 contacts (-81.8/contact) +
2D Compatibility (PS) -24097 + (NN) -3312 + (LL) 0
1D Compatibility (HY) -34800 + (ID) 10950
Total energy: -242252.0 ( -117.14 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_4BMZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BMZ-query.scw
PDB file :
Tito_Scwrl_4BMZ.pdb
: