Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGK-AKPI---ERMEEVIKVETLISTIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGV-KTLILSNGSLFYEPKVQQAL-KEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILSFSQIYQGQLVAEVLLIKGVNDSANNLKLIADFLKKINTARVDLSTIDRPSSFK----APKLSEDELLKCSLFFEGLCVSLPKRSTAQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF |
| 1TV8 Chain:A ((15-222)) | ----------------------DLRLSVT-DRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAE---LGVKKIRITG-GEPLMRRDLDVLIAKLNQI-DGIEDIGLTTNGLLLKKH-GQKLYDAGLRRINVSLDAIDDTLFQSINN-RNIKATTILEQIDYATSI-GLNVKVNVVIQKG--INDDQIIPMLEYFKDKHIE-IRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103918 for 1464 contacts (-71.0/contact) +
2D Compatibility (PS) -21724 + (NN) -14325 + (LL) 1940
1D Compatibility (HY) -9600 + (ID) 2000
Total energy: -149627.0 ( -102.20 by residue)
QMean score : 0.588
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