Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVNF------FATCLG--------AAIYSNASLNAIKLLRKENLEVVFKKDQTCCGQPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTG----MMRHDYLELFEGHAE----------FNMVKDFCSRVYELSEFLDKKLQVKYEDKGEPLKITWHSNCHALRVAKVID--SAKNLIRQLKN-VELIELEKEEECCGFGGTFSVKEPEISAVMVKEKIKDIESRHVDVIVSADAGCLMNISTAMQKMGSLTKPMH------------FYDFLASRLGL----- |
| 3G8Q Chain:A ((1-278)) | MKVSLAGQTVDVKKILNEIPKRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVVFV------TARPCLYCARELAEAGVAGVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRLDVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPENLSGRVEIMVTRGDPDEAVELLKEELPVFRIRR----FLISGEFD--RDELRERILEDIEPRILDPFAVRARIARAGAFSSSREAEVFIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74309 for 1708 contacts (-43.5/contact) +
2D Compatibility (PS) -24515 + (NN) -6560 + (LL) 816
1D Compatibility (HY) -11200 + (ID) 1950
Total energy: -117718.0 ( -68.92 by residue)
QMean score : 0.196
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