Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------MSEFHQV-----YDPLGNIWLSALVALLPIL-------------LFF-----LSLMVFKLKGYTA--AFLSVALSAIIAVLVYKMPVSMVGSSFLYGF----LYGLWPIAWIIIAAIFL-----YKLSV-------KSGYFEILKESV-------QSITLDHRILVILIGFCFGSFL----EGAIGFGGPIAITAAILVGLGLSPLYSAGLCLIANTAPVAFGAVGIPISAMASAVGVP-----AILISAMTGKILFFVSLLVPFFIVFLMDGFKGIKE--TFPAVFIAAFSFAGAQFLSSNYLGPELPGIISALVSLVATA----------LFLKFWQPKTIFRSDGKAISFTKTNH---HICKIYVAWSPFVILVLVIVLWIQPFF---KALFEKDGLLAFSNFYFEFNNISNHI----FKSPPFVEANQSVN-----FPVVFKLLLINTVGTSIFLAALV---SMLVLRVRVSDALSVFGETLKEMRYPILTIGLVLSFAYVSNYSGISSTLALALTHTGLAFTFFS----PLIGWVGVFLTGSDTSSNLLFGSLQQLTAQRLHLPEVLTLTAN--TVGGTLGKMISPQSIAIACAAVGLAGKESDLFKFTVKY-SLIFVAIMGVVISAIAYWIPEVVPAIK--------- |
| 4OK4 Chain:A ((30-733)) | HPNLIVTEQDVANIAASWESYDAYAEQLNADKTNLDAFMAEGVVVPMPKDAGGGYTHEQHKRNYKAIRNAGFLYQVTGDEKYLTFAKDLLLAYAKMYPSLGEHPNRKEQSPGRLFWQSLNEAVWLVYSIQGYDAIIDGLAAEEKQEIESGVFLPMAKFLSVESPETFNKIHNLGTWAVAAVGMTGYVLGNDELVEISLMGLDKTGKAGFMKQLDKLFSPDGYYTEGPYYQRYALMPFIWFAKAIETNEPERKIFEYRNNI-LLKAVYTTIDLSY---AGYFFPINDALKDKGIDTVELVHALAIVYSITGDNTLLDIAQEQGRI----SLTGDGLKVAKAVG-EGLTQPYNYRSILLGDGADGDQGALSIHRLGEGHNH--MALVAKNTSQGMGHGHFDKLNWLLYDNGNEIVTDYGAARYLNVEAKYGGHYLAENNTWAKQTIAHNTLVVNEQSHFYGDVTTADLHHPEVLSFYSGEDYQLSSAKEANAYDGVEFVRSMLLVNVPSLEHPIVVDVLNVSADKASTFDLPLYFNGQIIDFSFKVKDNKNVMKMLGKRNGYQH------LWLRNTAPVGDASERATWILDDRFYSYAFVTSTPSKKQNVLIAELGANDPNYNLRQQQVLIRRVEKAKQASFVSVLEPHGKYDGSLETTSGAYSNVKSVKHVSENG--KDVVVVDLKDGSNVVVALSYNANSEQVHKVNAGEEAIEWKGFSSVVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -535190 for 4224 contacts (-126.7/contact) +
2D Compatibility (PS) -55268 + (NN) 3964 + (LL) 2352
1D Compatibility (HY) -12800 + (ID) 5100
Total energy: -602042.0 ( -142.53 by residue)
QMean score : 0.118
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