Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENVPLSYDYSISKLFLYAMIAFGIIGMLIGIVLAFELSFPSLNYIAGEYGVFGRLRPLHTNAVIYGFTLGGIW-ASWYYIGQRVLKITYHQHPFLKIVGLLHFWLWILLLVLGVISLFAGLTQ--S-KEYAELMW-------PLDIIVV------VAWVLWGVNMFGSMSVRRENTI-----YVSLWYYIATYVGIAVMYIFNNLSIPTYFVA------DMGSVWHSISMYSGSNDALIQ---WWWGHNAVAFVFTSGVIGTIYYFLPKES-GQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAINMLLTMRGQWHQLKESPLIKFLVLASTFYMLSTLEGSIQAIKSVNALAHFTDWIIGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMTLGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKALIPYYNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREPNYATPMAR |
| 1V54 Chain:A ((13-493)) | --------NHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLL--GDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGA---PDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLL-------LLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEV-YILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGG--NIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGY-TLNDTWAKIHFAIMFVGVNMTFFPQHFLGL-SGMPRRYSDYP-----------DAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -422194 for 3757 contacts (-112.4/contact) +
2D Compatibility (PS) -43933 + (NN) 6874 + (LL) 3172
1D Compatibility (HY) -1600 + (ID) 1350
Total energy: -459031.0 ( -122.18 by residue)
QMean score : 0.178
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