Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISVAHSPDADDIFMYYAIKFGWIDCPIKNKIFHNIALDIETLNQEALKNTYDVSAISFGLYPKIANDYALLPTATSFGNG-Y-GPKLVKKKGVKLKKDFRVALSGEHTTNALLFKIYYK--------HARIAYMNFLDIEKAVLEGKAHAGVLIHESILDVHN------ELEVEKELWDVWKELIEVDLPLPLGGMAIRRSIP---LYRAILIKKALIKAVETALKHQDLLSDMLLERSLIRVNKERLQTYLSLYANETSTRLSEVQILAIDKLFELGYQHGFYANLLKTKDCLLTDEYLKYRFS |
2NXO Chain:A ((6-281)) | RPRVGHIQFLNCLPLYWGLARTGT-----LLDFELTKDTPEKLSEQLVRGDLDIGPVTLVEFLKNADDLVAFPDIAVGCDGPVMSCVIVSQVPLDRLDGARVALGSTSRTSVRLAQLLLSERFGVQPDYYT-CPPDL----SLM------AAVLIGDAALRANMIDGPRYGLD-VHDLGALWKEWT--GLPFVFAVWAARRDYAEREPVITRKVHEAFLASRNLSLEEVEKVAEQAAR-W-EAFDEDTLAKYFTT----LDFRFGAPQLEAVTEFARRVGPTTGFPADVKVELLKP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148022 for 2176 contacts (-68.0/contact) +
2D Compatibility (PS) -26822 + (NN) -7223 + (LL) 2812
1D Compatibility (HY) -6000 + (ID) 2100
Total energy: -187355.0 ( -86.10 by residue)
QMean score : 0.396
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