Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKSWTKKWFLILFLMASCFGHLVATTGEKYFKMANQALKRGDYHRAVAFYKRSCNLRMGVGCTSLGSMYEYGDGVDQNISKAVFYYRRGCNLRNHLACASLGSMYEDGDGVQKDFPKAIYYYRRGCHLKGGVSCGSLGFMYFNGTGVKQNYAKALSFSKYACSLNYGISCNFVGYMYKSAKGVEKDLKKALANFKRGCHLKD----GASCVSLGYLYEAGMDVKQNEEQALNLYKKGCSL-KEGSGCHNVAVMYYTGKG--APKDLEKATSYYKKGCALGFSGSCKVLEVIGKESDNLQDDAQNDTQDSVQ |
| 3RJV Chain:A ((4-209)) | ---------------------------------------------------------------------------------EPGSQYQQQAEAGDRRAQYYLADTWVS----SGDYQKAEYWAQKAAAQGDGDALALLAQLKIRN-PQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFDRISK------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94352 for 1709 contacts (-55.2/contact) +
2D Compatibility (PS) -19851 + (NN) -2553 + (LL) 5652
1D Compatibility (HY) -800 + (ID) 1600
Total energy: -113504.0 ( -66.42 by residue)
QMean score : 0.308
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