Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDY-GLEELEEV---------GDKIIIRGDYNS-----FKLLNEGFESLRLPIIKAGLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE |
3C19 Chain:A ((7-81)) | --------------------------------------------------------------------------------------------------------------------------------YEPSHLMFLVTVLDDR--DGEVLGDAIQKLIEREEVLACHAVPCVTKKNRPGHVLVVLVDGGEDPDRVAEDVARDIMVLTGSTGVDRFDADGVYSVPSRFEDVRVVYGEREWRVSVKIAETEEGEVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21309 for 338 contacts (-63.0/contact) +
2D Compatibility (PS) -6408 + (NN) -1884 + (LL) 8120
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -23031.0 ( -68.14 by residue)
QMean score : 0.564
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