Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEMELKLIKIDTSHYFEKKPGLGERMDYAGRCYYNKFQRVNAMLTSSLIQKHLKREIEIAHNLILRNDKVENIVFDYNGRNPERFYHKAQLLLREEGFMNFTAYNTKTPGHLH---LYVHKGHTELGEGERLIKTLSMKLAQGLPKEWRVFPSNEWPKEFNILALPYEVFAKERGSSWAKHL---------------------------------------------------------------------------------------------------------------------------- |
| 3G8Q Chain:A ((1-278)) | -MKVSLAGQTVDVKKILNEIP---------------KRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVVFVTAR-PCLYCARELAEAGVAGVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRLDVLLT---------FGGNPYLTEEDVAARVYCLLTG---RGFDADIAPAPENLSGRVEIMVTRGDPDEAVELLKEELPVFRIRRFLISGEFDRDELRERILEDIEPRILDPFAVRARIARAGAFSSSREAEVFIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16330 for 1148 contacts (-14.2/contact) +
2D Compatibility (PS) -15607 + (NN) -1375 + (LL) 1252
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -39060.0 ( -34.02 by residue)
QMean score : 0.155
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