Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVVLGSTGSIGKNALKIAKKF--GVKIEALSCGKNIALINEQIKVFKPKKVAILDPNDLNNL-EPLGAEVFVGLDGIDAMIEECV--SNLVINAIVGVAGLKASFKSLQRNKKLALANKESLVSAGHLL------DISQITPVDSEHFGLWALLQNKTLK-PKSLIISASGGAFRDTPLDLIAIQNAQNALKHPNWSMGDKITIDSASMVNKLFEILETYWLFGASL-KIDALIERSSIVHALVEFEDNSVIAHLASADMQLPISYAIN-PKLASLSASIKPLDLYALSAIKFEPISVERYTLWRYKDLLLENPKLG----VVLNASNEVAMKKFLNQEIAFGGFIQIISQALELYAKKSFKLSSLDEVLALDKEVRERFGSVARV |
| 1R0K Chain:D ((7-376)) | VTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHP---MGAKISIDSATMMNKGLELIEAFHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPK--RMETPAESLDFTKLRQMDFEAPDYERFPAL---TLAMESIKSGGARPAVMNAANEIAVAAFLDKKIGFLDIAKIVEKTLDHYTPAT--PSSLEDVFAIDNEARIQAAALMES |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222149 for 3001 contacts (-74.0/contact) +
2D Compatibility (PS) -36786 + (NN) -6711 + (LL) 820
1D Compatibility (HY) -26000 + (ID) 6550
Total energy: -297376.0 ( -99.09 by residue)
QMean score : 0.455
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