Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTENTDETHLRETKNKLGRKPKADANKKTRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEQGGGFIAFNLFLI
2GPE Chain:A ((3-44))
------------------------------TTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSD----------
General information:
TITO was launched using:
RESULT:
Template:
2GPE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6791 for 192 contacts (-35.4/contact) +
2D Compatibility (PS) -4609 + (NN) -2966 + (LL) 1648
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -15068.0 ( -78.48 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_2GPE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GPE-query.scw
PDB file :
Tito_Scwrl_2GPE.pdb
: