Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLLVNDECIACDA--CREECPSEAIEEGDPIYSIDPDRCTECYGYDDDEPRCVSVCPVDAILPDPNNAESKEELKYKYEILKEQD
1GAO Chain:D ((1-67))
-AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCAS-------CEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVW
General information:
TITO was launched using:
RESULT:
Template:
1GAO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47077 for 432 contacts (-109.0/contact) +
2D Compatibility (PS) -6971 + (NN) -7685 + (LL) 136
1D Compatibility (HY) -6000 + (ID) 1150
Total energy: -68747.0 ( -159.14 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_1GAO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GAO-query.scw
PDB file :
Tito_Scwrl_1GAO.pdb
: