Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISNISIHPKTMFKNALNIQDFSFKNHTSTAIIGTNGAGKSTLINTILGIRSDYNFKAQNNNIPYHDNVIPQRKQLGVVSNLFNYPPGLNANDLFKFYQFFHK-----------NCTLDLFEKNLLNKTYEHLSDGQKQRLKIDLALSHHPQLVIMDEPETSLEQNALIRLSNLISLRNT-QQLTSIIATHDPI-VLDSCEWVLLLKNGNIAQYKPLNSILKSVAKTFNFKEKPTTKDLLALLKDI |
| 1Z47 Chain:A ((28-238)) | -------------ARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTD-LPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80853 for 1527 contacts (-52.9/contact) +
2D Compatibility (PS) -21172 + (NN) -10875 + (LL) 964
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -122436.0 ( -80.18 by residue)
QMean score : 0.406
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