Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNDFNLLILSGPSGAGKSTLTKYLQEKIP--KTHFSLSTTTRKPREGEVDGLHYNFVSEEEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFDIDVQGHEILKKHYPNACSVFISTKNQEILKERLLLRGTDSKETIEKRLINAYKEMQCLESFDYLIINEDLEKSKEIILSIAKTLVHRLKAFNFEKICKAWKNESL
2F3R Chain:B ((5-175))
-----TLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRG----SEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKL---
General information:
TITO was launched using:
RESULT:
Template:
2F3R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49628 for 1193 contacts (-41.6/contact) +
2D Compatibility (PS) -18431 + (NN) -10287 + (LL) 380
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -93666.0 ( -78.51 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_2F3R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F3R-query.scw
PDB file :
Tito_Scwrl_2F3R.pdb
: