Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGTND
3OLW Chain:B ((6-124))
LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG-YGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTTEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLG
General information:
TITO was launched using:
RESULT:
Template:
3OLW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69250 for 940 contacts (-73.7/contact) +
2D Compatibility (PS) -13055 + (NN) -7689 + (LL) -76
1D Compatibility (HY) -14400 + (ID) 3000
Total energy: -107470.0 ( -114.33 by residue)
QMean score : 0.762
(partial model without unconserved sides chains):
PDB file :
Tito_3OLW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OLW-query.scw
PDB file :
Tito_Scwrl_3OLW.pdb
: