Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------MNAHKERLESNLLELLQEALASLNDSELNSLSVTKVECSKGKHHALVFVL----SSDHKILSKLKKA---EGLIRQFVLQASGWFKCPKLSFVLDDSLEKQLRLDAIFNEIAKGKDND
1BS2 Chain:A ((5-135))
ANMISQLKKLSIAEPAVAKDSHPDVNIVDLMRNYISQELSKISGVDSSLIFPALEWTNTMERGDLLIPIPRLRIKGANPKDLAVQWAEKFPCGDFLEKVEANG------PFIQFFFNPQFLAKLVIPDILTR---KEDYG
General information:
TITO was launched using:
RESULT:
Template:
1BS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8990 for 690 contacts (-13.0/contact) +
2D Compatibility (PS) -11317 + (NN) -6159 + (LL) 620
1D Compatibility (HY) -4400 + (ID) 500
Total energy: -30746.0 ( -44.56 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_1BS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BS2-query.scw
PDB file :
Tito_Scwrl_1BS2.pdb
: