Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQNAPFDLFISADIARPKKLYD-EKITPFKEEVYAKGVLV-LWSENL--------KMDSLEILKDPKIKRIAMANPKLAPYGKASMEVLDRLKLTPSLKSKIIYGASISQAHQFIATKNAQIGFGALSLIDK-KDKNLSYF-IIDKTLYNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 3R26 Chain:A ((7-237)) | ---------------------GKITVFAAASLTNAMQDIATQFKKE-KGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNG--GRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHK--KVEYPVAVVEGH-NNATVKAFYDYLKGPQAAEIFKRYGFTIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80919 for 1934 contacts (-41.8/contact) +
2D Compatibility (PS) -23055 + (NN) -6506 + (LL) 2964
1D Compatibility (HY) -4400 + (ID) 3000
Total energy: -114916.0 ( -59.42 by residue)
QMean score : 0.522
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