Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRTPKHLTKQESVNLGAYYTPPYLVDC---AYKLLKKHVGIENYTLLDTACGNKEFLKLHHP--------KKIGADIDPKCDALIINALAN-----------PK---RENYGIS---QDEPLIIVGNPPYNDRTSFIKQDIKNKDFIFEI----D----NDLKSRDLGISFL-KSFAILKPAF-ICVLHPLSYLIKEAN-FKQLK-LFKDHYRLLDAFVVSS-KSFTKSNEFPIVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPMRDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAFLEIKDAFLKDKRARLEYFKKLFQGHPCEFD |
| 3S1S Chain:A ((289-519)) | ----------RGRGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRK---FAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNFGLEHIFLYPREGLFEEVIK-DTVVFVGRKGSSVEEIEVLDSFTPLEQVDLHNLKRALSNSSNEQIIQPMGMELRKEKREELENRVTVGWRHITSNGRVAEEWITNNLESHCIRLVASDYDLRRGRVGNKGASDLLFINSKKKLWDLLDESVPRDWLYPALRKVNEINTPIF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71109 for 1399 contacts (-50.8/contact) +
2D Compatibility (PS) -20790 + (NN) -12389 + (LL) 864
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: -109524.0 ( -78.29 by residue)
QMean score : 0.415
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